Show Nav →

Overview Data source: UniProt

Official Gene Symbol Other Aliases
Tnnc1 Tncc
Sequence Length (AA) Molecular Weight (Da)
161 18421
Protein Name
Troponin C, slow skeletal and cardiac muscles
Sources
UniProt
PhosphoSitePlus ®
GeneCards
Human Protein Atlas

Protein Sequence hover to view complete sequence

10 20 30 40 50
MDDIYKAAVE QLTEEQKNEF KAAFDIFVLG AEDGCISTKE LGKVMRMLGQ
60 70 80 90 100
NPTPEELQEM IDEVDEDGSG TVDFDEFLVM MVRCMKDDSK GKSEEELSDL
110 120 130 140 150
FRMFDKNADG YIDLDELKMM LQATGETITE DDIEELMKDG DKNNDGRIDY
160 161
DEFLEFMKGV E

Data source: UniProt


Position of Targeted Peptide Analytes Relative to SNPs, Isoforms, and PTMs

Uniprot Database Entry PhosphoSitePlus ®

Click a point on a node
to view detailed assay information below
All other points link out to UniProt



Phosphorylation Acetylation Ubiquitylation Other

loading

Loader

Assay Details for non-CPTAC-4066 Collapse assay details

Data source: Panorama

Official Gene Symbol
Tnnc1
Peptide Sequence
SEEELSDLFR
Modification Type
unmodified
Protein - Site of Modification
N/A
Peptide - Site of Modification
N/A
Peptide Start
93
Peptide End
102
CPTAC ID
non-CPTAC-4066
Peptide Molecular Mass
1,223.5670
Species
Mus musculus (Mouse)
Assay Type
Direct MRM
Matrix
Plasma
Submitting Laboratory
UVic-Genome BC Proteomics Centre
Submitting Lab PI
Christoph Borchers

Assay Parameters Collapse assay parameters

Data source: Panorama

Instrument
Agilent 6490/6495 QQQ
Internal Standard
synthetic peptide
Peptide Standard Purity
>80%
Peptide Standard Label Type
13C and 15N at C-terminus R
LC
1290 LC (Agilent)
Column Packing
Zorbax Eclipse Plus C18, 1.8 µm
Column Dimensions
2.1 x 150 mm
Flow Rate
400 µL/min

Chromatograms

Data source: Panorama


Response Curves

Data source: Panorama

Retrieving Data

Loader

Repeatability

Data source: Panorama

  Average intra-assay CV
(within day CV)
Average inter-assay CV
(between day CV)
Total CV
equation
n=
Fragment ion / Transition Low Med High Low Med High Low Med High Low Med High
b2 (1+) 6.2 3.4 3.3 8.5 4 5.5 10.5 5.2 6.4 15 15 15
y5 (1+) 2.4 5.3 4.5 8.6 5.6 6.4 8.9 7.7 7.8 15 15 15
y6 (1+) 9.8 5.5 5.5 12.6 7.8 6.6 16 9.5 8.6 15 15 15
y7 (1+) 6.5 3.2 4.9 11.1 4.7 6.2 12.9 5.7 7.9 15 15 15
y8 (1+) 6.9 2.7 4.3 11.8 6 6.9 13.7 6.6 8.1 15 15 15
sum 2.8 1.6 2.1 7.9 4.1 4.8 8.4 4.4 5.2 15 15 15


Additional Resources and Comments