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Overview Data source: UniProt

Official Gene Symbol Other Aliases
Ift46 N/A
Sequence Length (AA) Molecular Weight (Da)
301 34054
Protein Name
Intraflagellar transport protein 46 homolog
Sources
UniProt
PhosphoSitePlus ®
GeneCards
Human Protein Atlas

Protein Sequence hover to view complete sequence

10 20 30 40 50
MADNSSDEYE EDNKEKKKPS QLTPQQGFSE NDDDDDDDSS ETDSDDDDDD
60 70 80 90 100
EEHGAPLEGA YDPADYEHLP VSAEIKELFE YISRYTPQLI DLDHKLKPFI
110 120 130 140 150
PDFIPAVGDI DAFLKVPRPD GKPDHLGLLV LDEPSTKQSD PTVLSLWLTE
160 170 180 190 200
NSKQHNITQH MKVKSLEDAE KNPKAIDTWI ESISELHRSK PPATVHYTRP
210 220 230 240 250
MPDIDTLMQE WSPEFEELLG KVSLPTVEID CSLAEYIDMI CAILDIPFYK
260 270 280 290 300
SRIQSLHLLF SLYSEFKNSQ HFKALAEGKK VFTPPPNSAS QAGDAETLTF
301
I

Data source: UniProt


Position of Targeted Peptide Analytes Relative to SNPs, Isoforms, and PTMs

Uniprot Database Entry PhosphoSitePlus ®

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to view detailed assay information below
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Phosphorylation Acetylation Ubiquitylation Other

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Assay Details for non-CPTAC-4041 Collapse assay details

Data source: Panorama

Official Gene Symbol
Ift46
Peptide Sequence
YTPQLIDLDHK
Modification Type
unmodified
Protein - Site of Modification
N/A
Peptide - Site of Modification
N/A
Peptide Start
85
Peptide End
95
CPTAC ID
non-CPTAC-4041
Peptide Molecular Mass
1,341.6929
Species
Mus musculus (Mouse)
Assay Type
Direct MRM
Matrix
Plasma
Submitting Laboratory
UVic-Genome BC Proteomics Centre
Submitting Lab PI
Christoph Borchers

Assay Parameters Collapse assay parameters

Data source: Panorama

Instrument
Agilent 6490/6495 QQQ
Internal Standard
synthetic peptide
Peptide Standard Purity
>80%
Peptide Standard Label Type
13C and 15N at C-terminus K
LC
1290 LC (Agilent)
Column Packing
Zorbax Eclipse Plus C18, 1.8 µm
Column Dimensions
2.1 x 150 mm
Flow Rate
400 µL/min

Chromatograms

Data source: Panorama


Response Curves

Data source: Panorama

Retrieving Data

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Repeatability

Data source: Panorama

  Average intra-assay CV
(within day CV)
Average inter-assay CV
(between day CV)
Total CV
equation
n=
Fragment ion / Transition Low Med High Low Med High Low Med High Low Med High
y5 (1+) 46.7 5.4 4.4 62.3 6.2 5.8 77.9 8.2 7.3 15 15 15
y2 (1+) 17 7.7 2.9 25.7 9.6 4.5 30.8 12.3 5.4 15 15 15
y9 (2+) 7.7 4.3 2.5 10.5 4.6 5.5 13 6.3 6 15 15 15
y9 (3+) 37.3 8 6.2 35 10.1 5.8 51.1 12.9 8.5 15 15 15
b2 (1+) 15.9 3.6 2 16.5 5.2 3.4 22.9 6.3 3.9 15 15 15
sum 6.4 3.1 1.8 10.3 4.2 4.4 12.1 5.2 4.8 15 15 15

Additional Resources and Comments