CSNK1G3, CPTAC-5627 - CPTAC Assay Portal | Office of Cancer Clinical Proteomics Research

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Overview Data source: UniProt

Official Gene Symbol	Other Aliases
CSNK1G3	N/A

Sequence Length (AA)	Molecular Weight (Da)
447	51389

Protein Name
Casein kinase I isoform gamma-3

Sources
UniProt PhosphoSitePlus ® GeneCards	Human Protein Atlas

Protein Sequence hover to view complete sequence

10	20	30	40	50
MENKKKDKDK	SDDRMARPSG	RSGHNTRGTG	SSSSGVLMVG	PNFRVGKKIG
60	70	80	90	100
CGNFGELRLG	KNLYTNEYVA	IKLEPMKSRA	PQLHLEYRFY	KQLGSGDGIP
110	120	130	140	150
QVYYFGPCGK	YNAMVLELLG	PSLEDLFDLC	DRTFSLKTVL	MIAIQLISRM
160	170	180	190	200
EYVHSKNLIY	RDVKPENFLI	GRPGNKTQQV	IHIIDFGLAK	EYIDPETKKH
210	220	230	240	250
IPYREHKSLT	GTARYMSINT	HLGKEQSRRD	DLEALGHMFM	YFLRGSLPWQ
260	270	280	290	300
GLKADTLKER	YQKIGDTKRA	TPIEVLCENF	PEMATYLRYV	RRLDFFEKPD
310	320	330	340	350
YDYLRKLFTD	LFDRKGYMFD	YEYDWIGKQL	PTPVGAVQQD	PALSSNREAH
360	370	380	390	400
QHRDKMQQSK	NQSADHRAAW	DSQQANPHHL	RAHLAADRHG	GSVQVVSSTN
410	420	430	440	447
GELNTDDPTA	GRSNAPITAP	TEVEVMDETK	CCCFFKRRKR	KTIQRHK

Data source: UniProt

Protein Map Collapse protein map

Position of Targeted Peptide Analytes Relative to SNPs, Isoforms, and PTMs

Uniprot Database Entry PhosphoSitePlus ®

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Assay Details for non-CPTAC-5627 Collapse assay details

Data source: Panorama

Official Gene Symbol: CSNK1G3
Peptide Sequence: GTGSSSSGVLMVGPNFR
Modification Type: unmodified
Protein - Site of Modification: N/A
Peptide - Site of Modification: 3
Peptide Start: 28
Peptide End: 44

CPTAC ID: non-CPTAC-5627
Peptide Molecular Mass: 1,651.7988
Species: Homo sapiens (Human)
Assay Type: Direct PRM
Matrix: SUM159 tryptic digest
Submitting Laboratory: Washington University in St. Louis
Submitting Lab PI: Reid Townsend

Assay Parameters Collapse assay parameters

Data source: Panorama

Instrument: Q-Exactive
Internal Standard: 25fmol
Peptide Standard Purity: >95%
Peptide Standard Label Type: 13C and 15N at C-terminus R

LC: EASY-nLC 1000
Column Packing: C18
Column Dimensions: 75 µm x 50 cm
Flow Rate: 300nL/min

Chromatograms

Data source: Panorama

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Response Curves

Data source: Panorama

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Retrieving Data

Repeatability

Data source: Panorama

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	Average intra-assay CV (within day CV)			Average inter-assay CV (between day CV)			Total CV			n=
Fragment ion / Transition	Low	Med	High	Low	Med	High	Low	Med	High	Low	Med	High
y7 (1+)	2.3	2.6	6.4	3	2.6	5.7	3.8	3.7	8.6	15	15	15
y5 (1+)	2.4	3	3.3	2.4	3.1	3.6	3.4	4.3	4.9	15	15	15
y8 (1+)	1.9	2.1	4.7	2.5	2.6	6.2	3.1	3.3	7.8	15	15	15
sum	1.9	1.9	2.4	2.2	2.2	3.6	2.9	2.9	4.3	15	15	15

CSNK1G3

Overview Data source: UniProt

Protein Sequence hover to view complete sequence

Protein Map Collapse protein map

Position of Targeted Peptide Analytes Relative to SNPs, Isoforms, and PTMs

Assay Details for non-CPTAC-5627 Collapse assay details

Assay Parameters Collapse assay parameters

Chromatograms

Response Curves

Repeatability

Additional Resources and Comments

Comments

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CSNK1G3

Overview Data source: UniProt

Protein Sequence hover to view complete sequence

Protein Map Collapse protein map

Position of Targeted Peptide Analytes Relative to SNPs, Isoforms, and PTMs

Assay Details for non-CPTAC-5627 Collapse assay details

Assay Parameters Collapse assay parameters

Chromatograms

Response Curves

Repeatability

Additional Resources and Comments

Comments