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Overview Data source: UniProt

Official Gene Symbol Other Aliases
FAM129A C1orf24, NIBAN
Sequence Length (AA) Molecular Weight (Da)
928 103135
Protein Name
Protein Niban
Sources
UniProt
PhosphoSitePlus ®
GeneCards
Human Protein Atlas

Protein Sequence hover to view complete sequence

10 20 30 40 50
MGGSASSQLD EGKCAYIRGK TEAAIKNFSP YYSRQYSVAF CNHVRTEVEQ
60 70 80 90 100
QRDLTSQFLK TKPPLAPGTI LYEAELSQFS EDIKKWKERY VVVKNDYAVE
110 120 130 140 150
SYENKEAYQR GAAPKCRILP AGGKVLTSED EYNLLSDRHF PDPLASSEKE
160 170 180 190 200
NTQPFVVLPK EFPVYLWQPF FRHGYFCFHE AADQKRFSAL LSDCVRHLNH
210 220 230 240 250
DYMKQMTFEA QAFLEAVQFF RQEKGHYGSW EMITGDEIQI LSNLVMEELL
260 270 280 290 300
PTLQTDLLPK MKGKKNDRKR TWLGLLEEAY TLVQHQVSEG LSALKEECRA
310 320 330 340 350
LTKGLEGTIR SDMDQIVNSK NYLIGKIKAM VAQPAEKSCL ESVQPFLASI
360 370 380 390 400
LEELMGPVSS GFSEVRVLFE KEVNEVSQNF QTTKDSVQLK EHLDRLMNLP
410 420 430 440 450
LHSVKMEPCY TKVNLLHERL QDLKSRFRFP HIDLVVQRTQ NYMQELMENA
460 470 480 490 500
VFTFEQLLSP HLQGEASKTA VAIEKVKLRV LKQYDYDSST IRKKIFQEAL
510 520 530 540 550
VQITLPTVQK ALASTCKPEL QKYEQFIFAD HTNMIHVENV YEEILHQILL
560 570 580 590 600
DETLKVIKEA AILKKHNLFE DNMALPSESV SSLTDLKPPT GSNQASPARR
610 620 630 640 650
ASAILPGVLG SETLSNEVFQ ESEEEKQPEV PSSLAKGESL SLPGPSPPPD
660 670 680 690 700
GTEQVIISRV DDPVVNPVAT EDTAGLPGTC SSELEFGGTL EDEEPAQEEP
710 720 730 740 750
EPITASGSLK ALRKLLTASV EVPVDSAPVM EEDTNGESHV PQENEEEEEK
760 770 780 790 800
EPSQAAAIHP DNCEESEVSE REAQPPCPEA HGEELGGFPE VGSPASPPAS
810 820 830 840 850
GGLTEEPLGP MEGELPGEAC TLTAHEGRGG KCTEEGDASQ QEGCTLGSDP
860 870 880 890 900
ICLSESQVSE EQEEMGGQSS AAQATASVNA EEIKVARIHE CQWVVEDAPN
910 920 928
PDVLLSHKDD VKEGEGGQES FPELPSEE

Data source: UniProt


Position of Targeted Peptide Analytes Relative to SNPs, Isoforms, and PTMs

Uniprot Database Entry PhosphoSitePlus ®

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All other points link out to UniProt



Phosphorylation Acetylation Ubiquitylation Other

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Assay Details for CPTAC-1623 Collapse assay details

Data source: Panorama

Official Gene Symbol
FAM129A
Peptide Sequence
VLTSEDEYNLLSDR
Modification Type
unmodified
Protein - Site of Modification
N/A
Peptide - Site of Modification
N/A
Peptide Start
125
Peptide End
138
CPTAC ID
CPTAC-1623
Peptide Molecular Mass
1,652.7893
Species
Homo sapiens (Human)
Assay Type
Direct MRM or SRM
Matrix
Ovarian cancer tumor tissue lysate
Submitting Laboratory
Pacific Northwest National Laboratory
Submitting Lab PI
Tao Liu

Assay Parameters Collapse assay parameters

Data source: Panorama

Instrument
TSQ Vantage
Internal Standard
peptide
Peptide Standard Purity
>95%
Peptide Standard Label Type
13C and 15N at C-terminus R
LC
Waters nanoACQUITY (Part Number 176016000)
Column Packing
Waters BEH C18, 1.7 um 130 Å (Part Number 186007485)
Column Dimensions
100 um x 100 mm
Flow Rate
0.5 uL/min

Assay Multiplexing Expand assay panel

Pacific Northwest National Laboratory-DirectSRM3

CPTAC-1593:
ABI2.
ALFDSYTNLER
CPTAC-1594:
ALDH2.
VAEQTPLTALYVANLIK
CPTAC-1595:
ANP32B.
ELVLDNC[+57.0]K
CPTAC-1596:
AP1B1.
LLSTDPVAAK
CPTAC-1597:
ARPC2.
VFMQEFK
CPTAC-1598:
BRD2.
LMFSNC[+57.0]YK
CPTAC-1599:
CDH1.
GLDARPEVTR
CPTAC-1600:
CBX3.
DSDEADLVLAK
CPTAC-1601:
CDC42.
NVFDEAILAALEPPEPK
CPTAC-1602:
CDK9.
IGQGTFGEVFK
CPTAC-1603:
C20orf27.
LLSVVPVPEGYSVK
CPTAC-1604:
DOCK2.
DILLPVITK
CPTAC-1605:
EHD2.
LEGHGLPANLPR
CPTAC-1606:
EML1.
VQMQEDDIQLLK
CPTAC-1607:
ENY2.
ALVPDSVK
CPTAC-1608:
FIGNL1.
GILLFGPPGTGK
CPTAC-1609:
GRB2.
ATADDELSFK
CPTAC-1610:
GTPBP1.
VGDNDFLEVR
CPTAC-1611:
C15orf38-AP3S2.
TGASWTDNIMAQK
CPTAC-1612:
HM13.
SFEAPIK
CPTAC-1613:
EPHX1.
DVELLYPVK
CPTAC-1614:
ITGA1.
FGTAIAAVK
CPTAC-1615:
PRKCA.
GTEELYAIK
CPTAC-1616:
LNPK.
IVEYLVGDGPQNR
CPTAC-1617:
LRP1.
AALSGANVLTLIEK
CPTAC-1618:
MCM2.
GLALALFGGEPK
CPTAC-1619:
MTA1.
YQADITDLLK
CPTAC-1620:
MYO1G.
TLVTLEQSR
CPTAC-1621:
NEK7.
VQIFDLMDAK
CPTAC-1622:
NF1.
LVFIDC[+57.0]PGK
CPTAC-1623:
FAM129A.
VLTSEDEYNLLSDR
CPTAC-1624:
NMRAL1.
LGFPGAR
CPTAC-1625:
OSBPL10.
LLEHGEEYVFTLPSAYAR
CPTAC-1626:
PIK3R1.
TATGYGFAEPYNLYSSLK
CPTAC-1627:
PACSIN2.
AIYHDLEQSIR
CPTAC-1628:
PAK2.
SVIDPVPAPVGDSHVDGAAK
CPTAC-1629:
PELP1.
TGSAVAPVHPPNR
CPTAC-1630:
PDGFRB.
LLGEVGTLQFAELHR
CPTAC-1631:
PIK3CA.
LINLTDILK
CPTAC-1632:
ARL6IP5.
AWDDFFPGSDR
CPTAC-1633:
RNF121.
GWC[+57.0]IVGK
CPTAC-1634:
POLR1E.
HFVGILNK
CPTAC-1635:
PDCD11.
VTPNEGLTVSFPFGK
CPTAC-1636:
SMARCA5.
TEQEEDEELLTESSK
CPTAC-1637:
SSBP1.
SGDSEVYQLGDVSQK
CPTAC-1638:
STAT5B.
ATQLLEGLVQELQK
CPTAC-1639:
STAT6.
SVSWSQFNK
CPTAC-1640:
STRN.
SELTDSASVLDNFK
CPTAC-1641:
SVIL.
YGSFEEAEASYPILNR
CPTAC-1642:
VARS.
NVIHPFLSR
CPTAC-1643:
CCT6A.
GIDPFSLDALSK
CPTAC-1644:
TGM2.
SEGTYC[+57.0]C[+57.0]GPVPVR
CPTAC-1645:
TIA1.
AAFAPFGR
CPTAC-1646:
TMEM43.
LEDPHVDIIR
CPTAC-1647:
TRA2A.
YGPLSGVNVVYDQR

Chromatograms

Data source: Panorama


Response Curves

Data source: Panorama

Retrieving Data

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Repeatability

Data source: Panorama

  Average intra-assay CV
(within day CV)
Average inter-assay CV
(between day CV)
Total CV
equation
n=
Fragment ion / Transition Low Med High Low Med High Low Med High Low Med High
y9 (1+) 4.5 2.6 3.2 10 6.3 9.9 11 6.8 10.4 15 15 15
y11 (1+) 3.3 4.3 3.9 10.6 6.7 5.2 11.1 8 6.5 15 15 15
y12 (1+) 5.6 11.5 7.1 10.7 13.6 7.4 12.1 17.8 10.3 15 15 15
sum 2.8 3.6 3.3 9.5 7 7 9.9 7.9 7.7 15 15 15

Additional Resources and Comments