| Official Gene Symbol | Other Aliases |
|---|---|
| RAD23B | N/A |
| Sequence Length (AA) | Molecular Weight (Da) |
|---|---|
| 409 | 43171 |
| Protein Name |
|---|
| UV excision repair protein RAD23 homolog B |
| Sources | |
|---|---|
|
UniProt PhosphoSitePlus ® GeneCards |
Human Protein Atlas |
| 10 | 20 | 30 | 40 | 50 |
| MQVTLKTLQQ | QTFKIDIDPE | ETVKALKEKI | ESEKGKDAFP | VAGQKLIYAG |
| 60 | 70 | 80 | 90 | 100 |
| KILNDDTALK | EYKIDEKNFV | VVMVTKPKAV | STPAPATTQQ | SAPASTTAVT |
| 110 | 120 | 130 | 140 | 150 |
| SSTTTTVAQA | PTPVPALAPT | STPASITPAS | ATASSEPAPA | SAAKQEKPAE |
| 160 | 170 | 180 | 190 | 200 |
| KPAETPVATS | PTATDSTSGD | SSRSNLFEDA | TSALVTGQSY | ENMVTEIMSM |
| 210 | 220 | 230 | 240 | 250 |
| GYEREQVIAA | LRASFNNPDR | AVEYLLMGIP | GDRESQAVVD | PPQAASTGAP |
| 260 | 270 | 280 | 290 | 300 |
| QSSAVAAAAA | TTTATTTTTS | SGGHPLEFLR | NQPQFQQMRQ | IIQQNPSLLP |
| 310 | 320 | 330 | 340 | 350 |
| ALLQQIGREN | PQLLQQISQH | QEHFIQMLNE | PVQEAGGQGG | GGGGGSGGIA |
| 360 | 370 | 380 | 390 | 400 |
| EAGSGHMNYI | QVTPQEKEAI | ERLKALGFPE | GLVIQAYFAC | EKNENLAANF |
| 409 | ||||
| LLQQNFDED |
Data source: UniProt
Uniprot Database Entry PhosphoSitePlus ®
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Data source: Panorama
View Details (opens in a new window)
Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma. Abbatiello SE, Schilling B, Mani DR, Zimmerman LJ, Hall SC, MacLean B, Albertolle M, Allen S, Burgess M, Cusack MP, Gosh M, Hedrick V, Held JM, Inerowicz HD, Jackson A, Keshishian H, Kinsinger CR, Lyssand J, Makowski L, Mesri M, Rodriguez H, Rudnick P, Sadowski P, Sedransk N, Shaddox K, Skates SJ, Kuhn E, Smith D, Whiteaker JR, Whitwell C, Zhang S, Borchers CH, Fisher SJ, Gibson BW, Liebler DC, MacCoss MJ, Neubert TA, Paulovich AG, Regnier FE, Tempst P, Carr SA. Mol Cell Proteomics. 2015 Sep;14(9):2357-74. doi: 10.1074/mcp.M114.047050. Epub 2015 Feb 18. PMID: 25693799
Data source: Panorama
Broad Institute-Plasma-based Candidate Cancer Biomarkers
Data source: Panorama
Data source: Panorama
Retrieving Data
Data source: Panorama
| Average intra-assay CV (within day CV) |
Average inter-assay CV (between day CV) |
Total CV |
n= | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Fragment ion / Transition | Low | Med | High | Low | Med | High | Low | Med | High | Low | Med | High |
| y5 (1+) | 2.7 | 1.5 | 1.7 | 4.6 | 6.9 | 3.3 | 5.3 | 7.1 | 3.7 | 15 | 15 | 15 |
| y4 (1+) | 1.7 | 1.9 | 1.2 | 3 | 6.4 | 2.8 | 3.4 | 6.7 | 3 | 15 | 15 | 15 |
| y6 (1+) | 3.1 | 2.6 | 3 | 5.4 | 6.3 | 3.8 | 6.2 | 6.8 | 4.8 | 15 | 15 | 15 |
| sum | 1.5 | 1.7 | 1.3 | 3.7 | 6.5 | 2.9 | 4 | 6.7 | 3.2 | 15 | 15 | 15 |
Data source: Panorama
View Details (opens in a new window)
Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma. Abbatiello SE, Schilling B, Mani DR, Zimmerman LJ, Hall SC, MacLean B, Albertolle M, Allen S, Burgess M, Cusack MP, Gosh M, Hedrick V, Held JM, Inerowicz HD, Jackson A, Keshishian H, Kinsinger CR, Lyssand J, Makowski L, Mesri M, Rodriguez H, Rudnick P, Sadowski P, Sedransk N, Shaddox K, Skates SJ, Kuhn E, Smith D, Whiteaker JR, Whitwell C, Zhang S, Borchers CH, Fisher SJ, Gibson BW, Liebler DC, MacCoss MJ, Neubert TA, Paulovich AG, Regnier FE, Tempst P, Carr SA. Mol Cell Proteomics. 2015 Sep;14(9):2357-74. doi: 10.1074/mcp.M114.047050. Epub 2015 Feb 18. PMID: 25693799
Data source: Panorama
Broad Institute-Plasma-based Candidate Cancer Biomarkers
Data source: Panorama
Data source: Panorama
Retrieving Data
Data source: Panorama
| Average intra-assay CV (within day CV) |
Average inter-assay CV (between day CV) |
Total CV |
n= | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Fragment ion / Transition | Low | Med | High | Low | Med | High | Low | Med | High | Low | Med | High |
| y6 (1+) | 3.9 | 1.7 | 1.2 | 7.7 | 6.4 | 2.2 | 8.6 | 6.6 | 2.5 | 15 | 15 | 15 |
| y8 (1+) | 4.3 | 1.9 | 2.1 | 6.1 | 6.9 | 3.8 | 7.5 | 7.2 | 4.3 | 15 | 15 | 15 |
| y7 (1+) | 5 | 2.1 | 1.4 | 9.3 | 6.4 | 3.5 | 10.6 | 6.7 | 3.8 | 15 | 15 | 15 |
| sum | 2.6 | 1.4 | 0.9 | 7.3 | 6.4 | 2.6 | 7.7 | 6.6 | 2.8 | 15 | 15 | 15 |
Data source: Panorama
View Details (opens in a new window)
Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma. Abbatiello SE, Schilling B, Mani DR, Zimmerman LJ, Hall SC, MacLean B, Albertolle M, Allen S, Burgess M, Cusack MP, Gosh M, Hedrick V, Held JM, Inerowicz HD, Jackson A, Keshishian H, Kinsinger CR, Lyssand J, Makowski L, Mesri M, Rodriguez H, Rudnick P, Sadowski P, Sedransk N, Shaddox K, Skates SJ, Kuhn E, Smith D, Whiteaker JR, Whitwell C, Zhang S, Borchers CH, Fisher SJ, Gibson BW, Liebler DC, MacCoss MJ, Neubert TA, Paulovich AG, Regnier FE, Tempst P, Carr SA. Mol Cell Proteomics. 2015 Sep;14(9):2357-74. doi: 10.1074/mcp.M114.047050. Epub 2015 Feb 18. PMID: 25693799
Data source: Panorama
Broad Institute-Plasma-based Candidate Cancer Biomarkers
Data source: Panorama
Data source: Panorama
Retrieving Data
Data source: Panorama
| Average intra-assay CV (within day CV) |
Average inter-assay CV (between day CV) |
Total CV |
n= | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Fragment ion / Transition | Low | Med | High | Low | Med | High | Low | Med | High | Low | Med | High |
| y7 (1+) | 2.2 | 2 | 1 | 2.9 | 5.8 | 2.9 | 3.6 | 6.1 | 3.1 | 15 | 15 | 15 |
| y8 (1+) | 3 | 2.2 | 1.3 | 4.5 | 6.8 | 3.6 | 5.4 | 7.1 | 3.8 | 15 | 15 | 15 |
| y6 (1+) | 3.9 | 2.6 | 1.4 | 5.3 | 6.2 | 3.5 | 6.6 | 6.7 | 3.8 | 15 | 15 | 15 |
| sum | 2 | 1.9 | 0.9 | 2.8 | 6 | 3.1 | 3.4 | 6.3 | 3.2 | 15 | 15 | 15 |
Data source: Panorama
View Details (opens in a new window)
Anti-peptide monoclonal antibodies generated for immuno-multiple reaction monitoring-mass spectrometry assays have a high probability of supporting Western blot and ELISA. Schoenherr RM, Saul RG, Whiteaker JR, Yan P, Whiteley GR, Paulovich AG. Mol Cell Proteomics. 2015 Feb;14(2):382-98. doi: 10.1074/mcp.O114.043133. Epub 2014 Dec 15. PMID: 25512614
Data source: Panorama
Broad Institute-Plasma-based Candidate Cancer Biomarkers
Data source: Panorama
Data source: Panorama
Retrieving Data
Data source: Panorama
| Average intra-assay CV (within day CV) |
Average inter-assay CV (between day CV) |
Total CV |
n= | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Fragment ion / Transition | Low | Med | High | Low | Med | High | Low | Med | High | Low | Med | High |
| y6 (1+) | 13.9 | 4.9 | 3.9 | 17.2 | 5.3 | 5.2 | 22.1 | 7.2 | 6.5 | 15 | 15 | 15 |
| y7 (1+) | 24.4 | 7.3 | 2.4 | 27.3 | 6.1 | 5.4 | 36.6 | 9.5 | 5.9 | 15 | 15 | 15 |
| y8 (1+) | 14.6 | 5.2 | 4.1 | 20.2 | 5.9 | 6.8 | 24.9 | 7.9 | 7.9 | 15 | 15 | 15 |
| sum | 14.1 | 2.6 | 2.7 | 17.6 | 3.9 | 5.3 | 22.6 | 4.7 | 5.9 | 15 | 15 | 15 |
Data source: Panorama
View Details (opens in a new window)
A Multiplexed Mass Spectrometry-Based Assay for Robust Quantification of Phosphosignaling in Response to DNA Damage. Whiteaker JR, Zhao L, Saul R, Kaczmarczyk JA, Schoenherr RM, Moore HD, Jones-Weinert C, Ivey RG, Lin C, Hiltke T, Reding KW, Whiteley G, Wang P, Paulovich AG. Radiat Res. 2018 Feb 23. doi: 10.1667/RR14963.1. [Epub ahead of print]
Data source: Panorama
Broad Institute-Plasma-based Candidate Cancer Biomarkers
Data source: Panorama
Data source: Panorama
Retrieving Data
Data source: Panorama
| Average intra-assay CV (within day CV) |
Average inter-assay CV (between day CV) |
Total CV |
n= | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Fragment ion / Transition | Low | Med | High | Low | Med | High | Low | Med | High | Low | Med | High |
| y8 (1+) | 23.5 | 10.4 | 12.8 | 26 | 11.1 | 11.3 | 35 | 15.2 | 17.1 | 15 | 15 | 15 |
| y7 (1+) | 21.3 | 14.4 | 13.2 | 23.7 | 14.8 | 13.8 | 31.9 | 20.6 | 19.1 | 15 | 15 | 15 |
| y6 (1+) | 23.1 | 13.4 | 11.2 | 25.7 | 14.6 | 10.7 | 34.6 | 19.8 | 15.5 | 15 | 15 | 15 |
| sum | 16.1 | 8 | 9.9 | 19.9 | 8.6 | 8.4 | 25.6 | 11.7 | 13 | 15 | 15 | 15 |
Data source: Panorama
View Details (opens in a new window)
Anti-peptide monoclonal antibodies generated for immuno-multiple reaction monitoring-mass spectrometry assays have a high probability of supporting Western blot and ELISA. Schoenherr RM, Saul RG, Whiteaker JR, Yan P, Whiteley GR, Paulovich AG. Mol Cell Proteomics. 2015 Feb;14(2):382-98. doi: 10.1074/mcp.O114.043133. Epub 2014 Dec 15. PMID: 25512614
Data source: Panorama
Broad Institute-Plasma-based Candidate Cancer Biomarkers
Data source: Panorama
Data source: Panorama
Retrieving Data
Data source: Panorama
| Average intra-assay CV (within day CV) |
Average inter-assay CV (between day CV) |
Total CV |
n= | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Fragment ion / Transition | Low | Med | High | Low | Med | High | Low | Med | High | Low | Med | High |
| y8 (2+) | 57 | 31.1 | 7.1 | 72.3 | 28.9 | 7.5 | 92.1 | 42.5 | 10.3 | 15 | 15 | 15 |
| y4 (1+) | 61.4 | 25.8 | 11 | 65.6 | 27.4 | 10.5 | 89.9 | 37.6 | 15.2 | 15 | 15 | 15 |
| y5 (1+) | 33 | 29 | 7 | 54.5 | 31.6 | 6.6 | 63.7 | 42.9 | 9.6 | 15 | 15 | 15 |
| y8 (1+) | 18.6 | 6.2 | 2.9 | 14.7 | 5 | 2.8 | 23.7 | 8 | 4 | 15 | 15 | 15 |
| sum | 18.8 | 5.1 | 2.1 | 28 | 5.2 | 2.3 | 33.7 | 7.3 | 3.1 | 15 | 15 | 15 |
Data source: Panorama
View Details (opens in a new window)
A Multiplexed Mass Spectrometry-Based Assay for Robust Quantification of Phosphosignaling in Response to DNA Damage. Whiteaker JR, Zhao L, Saul R, Kaczmarczyk JA, Schoenherr RM, Moore HD, Jones-Weinert C, Ivey RG, Lin C, Hiltke T, Reding KW, Whiteley G, Wang P, Paulovich AG. Radiat Res. 2018 Feb 23. doi: 10.1667/RR14963.1. [Epub ahead of print]
Data source: Panorama
Broad Institute-Plasma-based Candidate Cancer Biomarkers
Data source: Panorama
Data source: Panorama
Retrieving Data
Data source: Panorama
| Average intra-assay CV (within day CV) |
Average inter-assay CV (between day CV) |
Total CV |
n= | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Fragment ion / Transition | Low | Med | High | Low | Med | High | Low | Med | High | Low | Med | High |
| y5 (1+) | 44.1 | 17.6 | 11.2 | 49.9 | 18.7 | 12.1 | 66.6 | 25.7 | 16.5 | 15 | 15 | 15 |
| y8 (2+) | 28.6 | 16.3 | 14.7 | 47.8 | 14.6 | 16 | 55.7 | 21.9 | 21.7 | 15 | 15 | 15 |
| y4 (1+) | 38.8 | 17.8 | 11.2 | 38.3 | 19 | 17.4 | 54.5 | 26 | 20.7 | 15 | 15 | 15 |
| y7 (1+) | 5.4 | 5.8 | 6.4 | 8.6 | 10.6 | 6.6 | 10.2 | 12.1 | 9.2 | 15 | 15 | 15 |
| y6 (1+) | 20.2 | 12.8 | 11.9 | 37.5 | 13.1 | 14.4 | 42.6 | 18.3 | 18.7 | 15 | 15 | 15 |
| y8 (1+) | 24.2 | 7.8 | 7.3 | 26.8 | 10.5 | 8.7 | 36.1 | 13.1 | 11.4 | 15 | 15 | 15 |
| sum | 8.7 | 3.8 | 6.2 | 10.2 | 7.8 | 6.4 | 13.4 | 8.7 | 8.9 | 15 | 15 | 15 |
Data source: Panorama
View Details (opens in a new window)
Molecular phenotyping of laboratory mouse strains using 500 multiple reaction monitoring mass spectrometry plasma assays. Michaud SA, Sinclair NJ, Petrošová H, Palmer AL, Pistawka AJ, Zhang S, Hardie DB, Mohammed Y Eshghi A1, Richard VR, Sickmann A, Borchers CH. Commun Biol. 2018 Jun 27;1:78. doi: 10.1038/s42003-018-0087-6. eCollection 2018.
Data source: Panorama
Broad Institute-Plasma-based Candidate Cancer Biomarkers
Data source: Panorama
Data source: Panorama
Retrieving Data
Data source: Panorama
| Average intra-assay CV (within day CV) |
Average inter-assay CV (between day CV) |
Total CV |
n= | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Fragment ion / Transition | Low | Med | High | Low | Med | High | Low | Med | High | Low | Med | High |
| b4 (2+) | 93.3 | 105.8 | 86.1 | 79.6 | 128.5 | 162.6 | 122.6 | 166.5 | 184 | 15 | 15 | 15 |
| b2 (1+) | 7.1 | 3.7 | 4.9 | 8.6 | 7.6 | 6.4 | 11.2 | 8.5 | 8.1 | 15 | 15 | 15 |
| y2 (1+) | 24.8 | 12.7 | 7.2 | 21.9 | 21.4 | 8.8 | 33.1 | 24.9 | 11.4 | 15 | 15 | 15 |
| y7 (1+) | 8.7 | 3.2 | 4.6 | 9.6 | 8.1 | 6.3 | 13 | 8.7 | 7.8 | 15 | 15 | 15 |
| y8 (1+) | 10.6 | 4.5 | 4.4 | 14.4 | 10.7 | 7.6 | 17.9 | 11.6 | 8.8 | 15 | 15 | 15 |
| sum | 5 | 2.4 | 2.7 | 7 | 8.2 | 3.5 | 8.6 | 8.5 | 4.4 | 15 | 15 | 15 |
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