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Overview Data source: UniProt

Official Gene Symbol Other Aliases
CALCOCO2 NDP52
Sequence Length (AA) Molecular Weight (Da)
446 52254
Protein Name
Calcium-binding and coiled-coil domain-containing protein 2
Sources
UniProt
PhosphoSitePlus ®
GeneCards
Human Protein Atlas

Protein Sequence hover to view complete sequence

10 20 30 40 50
MEETIKDPPT SAVLLDHCHF SQVIFNSVEK FYIPGGDVTC HYTFTQHFIP
60 70 80 90 100
RRKDWIGIFR VGWKTTREYY TFMWVTLPID LNNKSAKQQE VQFKAYYLPK
110 120 130 140 150
DDEYYQFCYV DEDGVVRGAS IPFQFRPENE EDILVVTTQG EVEEIEQHNK
160 170 180 190 200
ELCKENQELK DSCISLQKQN SDMQAELQKK QEELETLQSI NKKLELKVKE
210 220 230 240 250
QKDYWETELL QLKEQNQKMS SENEKMGIRV DQLQAQLSTQ EKEMEKLVQG
260 270 280 290 300
DQDKTEQLEQ LKKENDHLFL SLTEQRKDQK KLEQTVEQMK QNETTAMKKQ
310 320 330 340 350
QELMDENFDL SKRLSENEII CNALQRQKER LEGENDLLKR ENSRLLSYMG
360 370 380 390 400
LDFNSLPYQV PTSDEGGARQ NPGLAYGNPY SGIQESSSPS PLSIKKCPIC
410 420 430 440 446
KADDICDHTL EQQQMQPLCF NCPICDKIFP ATEKQIFEDH VFCHSL

Data source: UniProt


Position of Targeted Peptide Analytes Relative to SNPs, Isoforms, and PTMs

Uniprot Database Entry PhosphoSitePlus ®

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Phosphorylation Acetylation Ubiquitylation Other

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Assay Details for CPTAC-1312 Collapse assay details

Data source: Panorama

Official Gene Symbol
CALCOCO2
Peptide Modified Sequence
SAN[+1.0]STLAQALHWTR
Modification Type
Deamidated (N)
Protein - Site of Modification
3
Peptide - Site of Modification
3
Peptide Start
1
Peptide End
14
CPTAC ID
CPTAC-1312
Peptide Molecular Mass
1,555.7743
Species
Homo sapiens (Human)
Assay Type
Direct MRM
Matrix
Human ovarian tumor tissue digest
Submitting Laboratory
Johns Hopkins University
Submitting Lab PI
Daniel Chan, Hui Zhang, Zhen Zhang

Assay Parameters Collapse assay parameters Test button response curves

Data source: Panorama

Instrument
TSQ Vantage
Internal Standard
Stable isotope-labeled peptides
Peptide Standard Purity
Crude (~60%)
Peptide Standard Label Type
13C and 15N at C-terminus R
LC
Accela 1250 Quaternary Low Pump
Column Packing
C18, 3 µm, 300 Å
Column Dimensions
1.0 mm I.D. x 15 cm
Flow Rate
50 µL/min

Assay Multiplexing Expand assay panel

Johns Hopkins University-D


Chromatograms

Data source: Panorama


Response Curves

Data source: Panorama

Retrieving Data

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Repeatability

Data source: Panorama

  Average intra-assay CV
(within day CV)
Average inter-assay CV
(between day CV)
Total CV
equation
n=
Fragment ion / Transition Low Med High Low Med High Low Med High Low Med High
y8 (1+) 7.1 1.7 1.5 6.5 1.9 1.4 9.6 2.5 2.1 15 15 15
y6 (1+) 4.6 1.8 1.5 5.7 2.1 1.4 7.3 2.8 2.1 15 15 15
y4 (1+) 4.6 2.2 1.4 5.6 2.5 2 7.2 3.3 2.4 15 15 15
sum 3.5 1.3 1.1 3.9 1.5 1.2 5.2 2 1.6 15 15 15

Additional Resources and Comments