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Overview Data source: UniProt

Official Gene Symbol Other Aliases
BPIFB1 C20orf114, LPLUNC1
Sequence Length (AA) Molecular Weight (Da)
484 52442
Protein Name
BPI fold-containing family B member 1
Sources
UniProt
PhosphoSitePlus ®
GeneCards
Human Protein Atlas

Protein Sequence hover to view complete sequence

10 20 30 40 50
MAGPWTFTLL CGLLAATLIQ ATLSPTAVLI LGPKVIKEKL TQELKDHNAT
60 70 80 90 100
SILQQLPLLS AMREKPAGGI PVLGSLVNTV LKHIIWLKVI TANILQLQVK
110 120 130 140 150
PSANDQELLV KIPLDMVAGF NTPLVKTIVE FHMTTEAQAT IRMDTSASGP
160 170 180 190 200
TRLVLSDCAT SHGSLRIQLL HKLSFLVNAL AKQVMNLLVP SLPNLVKNQL
210 220 230 240 250
CPVIEASFNG MYADLLQLVK VPISLSIDRL EFDLLYPAIK GDTIQLYLGA
260 270 280 290 300
KLLDSQGKVT KWFNNSAASL TMPTLDNIPF SLIVSQDVVK AAVAAVLSPE
310 320 330 340 350
EFMVLLDSVL PESAHRLKSS IGLINEKAAD KLGSTQIVKI LTQDTPEFFI
360 370 380 390 400
DQGHAKVAQL IVLEVFPSSE ALRPLFTLGI EASSEAQFYT KGDQLILNLN
410 420 430 440 450
NISSDRIQLM NSGIGWFQPD VLKNIITEII HSILLPNQNG KLRSGVPVSL
460 470 480 484
VKALGFEAAE SSLTKDALVL TPASLWKPSS PVSQ

Data source: UniProt


Position of Targeted Peptide Analytes Relative to SNPs, Isoforms, and PTMs

Uniprot Database Entry PhosphoSitePlus ®

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Phosphorylation Acetylation Ubiquitylation Other

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Assay Details for CPTAC-1490 Collapse assay details

Data source: Panorama

Official Gene Symbol
BPIFB1
Peptide Modified Sequence
DHN[+1.0]ATSILQQLPLLSAM[+16.0]R
Modification Type
Deamidated (N), Oxidation (M)
Protein - Site of Modification
48, 62
Peptide - Site of Modification
3, 17
Peptide Start
46
Peptide End
63
CPTAC ID
CPTAC-1490
Peptide Molecular Mass
2,024.0361
Species
Homo sapiens (Human)
Assay Type
Direct MRM
Matrix
Human ovarian tumor tissue digest
Submitting Laboratory
Johns Hopkins University
Submitting Lab PI
Daniel Chan, Hui Zhang, Zhen Zhang

Assay Parameters Collapse assay parameters

Data source: Panorama

Instrument
TSQ Vantage
Internal Standard
Stable isotope-labeled peptides
Peptide Standard Purity
Crude (~60%)
Peptide Standard Label Type
13C and 15N at C-terminus R
LC
Accela 1250 Quaternary Low Pump
Column Packing
C18, 3 µm, 300 Å
Column Dimensions
1.0 mm I.D. x 15 cm
Flow Rate
50 µL/min

Assay Multiplexing Expand assay panel

Johns Hopkins University-E


Chromatograms

Data source: Panorama


Response Curves

Data source: Panorama

Retrieving Data

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Repeatability

Data source: Panorama

  Average intra-assay CV
(within day CV)
Average inter-assay CV
(between day CV)
Total CV
equation
n=
Fragment ion / Transition Low Med High Low Med High Low Med High Low Med High
b7 (1+) 3.1 3.7 5.7 3.2 3.9 6.2 4.5 5.4 8.4 15 15 15
b8 (1+) 3.4 3.5 4.5 3.7 3.6 3.5 5 5 5.7 15 15 15
y7 (1+) 2.5 2.1 2.7 3.2 2.4 2.1 4.1 3.2 3.4 15 15 15
sum 2.2 2.3 2.3 2.5 2.5 2.5 3.3 3.4 3.4 15 15 15

Additional Resources and Comments