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Overview Data source: UniProt

Official Gene Symbol Other Aliases
CHST3 N/A
Sequence Length (AA) Molecular Weight (Da)
479 54706
Protein Name
Carbohydrate sulfotransferase 3
Sources
UniProt
PhosphoSitePlus ®
GeneCards
Human Protein Atlas

Protein Sequence hover to view complete sequence

10 20 30 40 50
MEKGLTLPQD CRDFVHSLKM RSKYALFLVF VVIVFVFIEK ENKIISRVSD
60 70 80 90 100
KLKQIPQALA DANSTDPALI LAENASLLSL SELDSAFSQL QSRLRNLSLQ
110 120 130 140 150
LGVEPAMEAA GEEEEEQRKE EEPPRPAVAG PRRHVLLMAT TRTGSSFVGE
160 170 180 190 200
FFNQQGNIFY LFEPLWHIER TVSFEPGGAN AAGSALVYRD VLKQLFLCDL
210 220 230 240 250
YVLEHFITPL PEDHLTQFMF RRGSSRSLCE DPVCTPFVKK VFEKYHCKNR
260 270 280 290 300
RCGPLNVTLA AEACRRKEHM ALKAVRIRQL EFLQPLAEDP RLDLRVIQLV
310 320 330 340 350
RDPRAVLASR MVAFAGKYKT WKKWLDDEGQ DGLREEEVQR LRGNCESIRL
360 370 380 390 400
SAELGLRQPA WLRGRYMLVR YEDVARGPLQ KAREMYRFAG IPLTPQVEDW
410 420 430 440 450
IQKNTQAAHD GSGIYSTQKN SSEQFEKWRF SMPFKLAQVV QAACGPAMRL
460 470 479
FGYKLARDAA ALTNRSVSLL EERGTFWVT

Data source: UniProt


Position of Targeted Peptide Analytes Relative to SNPs, Isoforms, and PTMs

Uniprot Database Entry PhosphoSitePlus ®

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Phosphorylation Acetylation Ubiquitylation Other

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Assay Details for CPTAC-1483 Collapse assay details

Data source: Panorama

Official Gene Symbol
CHST3
Peptide Modified Sequence
N[+1.0]SSEQFEK
Modification Type
Deamidated (N)
Protein - Site of Modification
420
Peptide - Site of Modification
1
Peptide Start
420
Peptide End
427
CPTAC ID
CPTAC-1483
Peptide Molecular Mass
968.4087
Species
Homo sapiens (Human)
Assay Type
Direct MRM
Matrix
Human ovarian tumor tissue digest
Submitting Laboratory
Johns Hopkins University
Submitting Lab PI
Daniel Chan, Hui Zhang, Zhen Zhang

Assay Parameters Collapse assay parameters Test button response curves

Data source: Panorama

Instrument
TSQ Vantage
Internal Standard
Stable isotope-labeled peptides
Peptide Standard Purity
Crude (~60%)
Peptide Standard Label Type
13C and 15N at C-terminus K
LC
Accela 1250 Quaternary Low Pump
Column Packing
C18, 3 µm, 300 Å
Column Dimensions
1.0 mm I.D. x 15 cm
Flow Rate
50 µL/min

Assay Multiplexing Expand assay panel

Johns Hopkins University-E


Chromatograms

Data source: Panorama


Response Curves

Data source: Panorama

Retrieving Data

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Repeatability

Data source: Panorama

  Average intra-assay CV
(within day CV)
Average inter-assay CV
(between day CV)
Total CV
equation
n=
Fragment ion / Transition Low Med High Low Med High Low Med High Low Med High
y6 (1+) 5.9 6.4 3.3 6.7 5.9 2.9 8.9 8.7 4.4 15 15 15
y5 (1+) 26 10.7 6.1 22.4 12.4 5.6 34.3 16.4 8.3 15 15 15
y4 (1+) 27.4 14.8 8.7 25.4 14.1 8.7 37.4 20.4 12.3 15 15 15
sum 8.8 4.7 3.5 6.8 4.3 2.8 11.1 6.4 4.5 15 15 15

Additional Resources and Comments